Johnson intercooler pump "may still have air in system"..
Manifold intake temperature range is 135°-180°
The johnson pump has a red and a black wire. The OEM pump has a brown and a black wire.
A COMMON mistake is to cut the pigtail connector off the OEM pump and splice it to the johnson pump, black to black, and tan to red. This is incorrect polarity, the johnson pump runs backwards, and doesn't pump very well, if at all.
Correct polarity is pigtail tan to johnson black. Pigtail black to johnson red.
Something to check. Your MAT are too high, although if you have functioning EGR, EGR raises MAT significantly.